Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015893945.1_cds_XP_016447470.1_42227
CDS Infomation

[gene=LOC107772477] [db_xref=GeneID:107772477] [protein=uncharacterized protein LOC107772477 isoform X2] [protein_id=XP_016447470.1] [location=join(8196..8540,8648..8764,10189..10271,12043..12503,13469..13644,14213..14298,15225..15358,17174..17326,17421..17431)] [gbkey=CDS]
Sequence

ATGGATGTGGAAGAAGATATACCAACGGCCCAAAAATCCACTCCTAGAAAACGTGGAAGG
CCTGAAGATGATTATGATCGTGGAATTAACCAATCCACCGAAAAAAGAAGATTAAACGCA
ATCATATTAGCAAATTCAAAACCAAGTTATTGCCTAAAGCGAGGTGTAGGAAGTTTACAC
CAAGATTTTCAGAGTTTACGGTCTGAACATAGGCGAAGACTTCGGCGTTTACTGCAAAAA
TTGATGCGGCAACATAAATGGGCTGAGGCTAGTGGTGTATTAAGCGTACTTCTTAAAGGG
ACTGTACAAGAAAAAGCCATATTGAAAACTCGGAACAAGTTTACGGCTACTTTGGAGCTT
ATTGAGCATATAAAAGGTGACACTATGAGTACTAGAAGGATACAGAATATTTATGAGCTT
TGGATGAAGAAGCTTGGACCTATGAAAAACTGGCCCATGAAGGATCGTTTTGCTGTTCAG
TTGGAATTCATCCTTTTCTGTCTCAAATGCGGGAACACAGAGGACGCTCATCAGGCTGCC
TTATCTGTCATGCAGGAACGTGGTTTTGAGAGTGATCCTGTCTCTAATTTAGTTGTGGGC
CTGACTTTTTATCAGTTATGGTATTCTACTATCCCGAAGGAGTTGCATTTGCCAGAGTTG
GACAGATTTGATAGCCCGGTGCAGTCAGAGAACTTCGAGGACAGAATATATATGTCCATT
TTAAATTCAGAGAGGCATGATGCTGTTGAAGGCCAAGAGGCTAATTCTCCGTTACATTGT
GATTCAAACACCTCTATTAGGAATGACAAAGAGATCTCGGGAGTTGATCTCAGTCAACTG
AGACAAGTGCCTGTGGTCTTTGATGATAATGTGCCGGGAGAAACACGAAATGACAATTTT
CAGGCACAAGATTTTTACATGAATTCTGCTGAAAGAAGTGATCATGAAGGTTCTTCTATG
GGTCATAGTGGTGATGTGCCTTATCATTCCATATTCTACAGTCGCGGTCTTCCATTGTGG
TTATTGCCTTTACAATTGCCTTCCTCAAATGAAAATTTAGAGGATGACCTCGCTATGCAC
CGGACCTTGCGTAATAACCATTATAAGAATGCAATAAAGTATTTACGACATGCTTTGTAC
TCGAATCCACCAGCACTCGAGGCTTTTCATCCTTTAATACAGATGCTGCTGCTCGGGGAT
CAGGTAAAGGAGGCTCTTGATGAGGTGGAAAAATTTTCTCCGTACTCCGACACATCATTT
CAGTTGAGGTTGAAAGCTGCTATCTTGGAGCATTTTGACAGTGGTAACTATGTCAAACTT
TCAACAATGTTTGAGGAAAATTTGGAAAAGGATCCTACATGTAGCCACTCATTAGGGAGA
CTCATCAGCTTGCATAGAAGTGGAGAGTATAGCACTGAAAAGCTTGTGGAAATGATAGCT
TTGCATTTGGATGCTACTCTTGCAAAATGTGACACATGGAAGGAGTTAGCGTGTTGCTTC
CTGAGACTTTCTCAGTGTGAAGAAGATTGCATGTCTGTGTGCTTCAATGGTGAAGATGGT
GGCTGA

Peptide Sequence

PEP ID

XP_016447470.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107772477 isoform X2 [Nicotiana tabacum]
Sequence

MDVEEDIPTAQKSTPRKRGRPEDDYDRGINQSTEKRRLNAIILANSKPSYCLKRGVGSLH
QDFQSLRSEHRRRLRRLLQKLMRQHKWAEASGVLSVLLKGTVQEKAILKTRNKFTATLEL
IEHIKGDTMSTRRIQNIYELWMKKLGPMKNWPMKDRFAVQLEFILFCLKCGNTEDAHQAA
LSVMQERGFESDPVSNLVVGLTFYQLWYSTIPKELHLPELDRFDSPVQSENFEDRIYMSI
LNSERHDAVEGQEANSPLHCDSNTSIRNDKEISGVDLSQLRQVPVVFDDNVPGETRNDNF
QAQDFYMNSAERSDHEGSSMGHSGDVPYHSIFYSRGLPLWLLPLQLPSSNENLEDDLAMH
RTLRNNHYKNAIKYLRHALYSNPPALEAFHPLIQMLLLGDQVKEALDEVEKFSPYSDTSF
QLRLKAAILEHFDSGNYVKLSTMFEENLEKDPTCSHSLGRLISLHRSGEYSTEKLVEMIA
LHLDATLAKCDTWKELACCFLRLSQCEEDCMSVCFNGEDGG

Transcript Sequence

Gene sequence data has not been registered.